miRGen 2.0: A database of microRNA genomic information and regulation

Alexiou, P; Vergoulis, T; Gleditzsch, M; Prekas, G; Dalamagas, T; Megraw, M; Grosse, I; Sellis, T; Hatzigeorgiou, AG

dc.contributor.author	Alexiou, P	en
dc.contributor.author	Vergoulis, T	en
dc.contributor.author	Gleditzsch, M	en
dc.contributor.author	Prekas, G	en
dc.contributor.author	Dalamagas, T	en
dc.contributor.author	Megraw, M	en
dc.contributor.author	Grosse, I	en
dc.contributor.author	Sellis, T	en
dc.contributor.author	Hatzigeorgiou, AG	en
dc.date.accessioned	2014-03-01T01:33:44Z
dc.date.available	2014-03-01T01:33:44Z
dc.date.issued	2010	en
dc.identifier.issn	0305-1048	en
dc.identifier.uri	https://dspace.lib.ntua.gr/xmlui/handle/123456789/20567
dc.subject.classification	Biochemistry & Molecular Biology	en
dc.subject.other	messenger RNA	en
dc.subject.other	microRNA	en
dc.subject.other	transcription factor	en
dc.subject.other	untranslated RNA	en
dc.subject.other	3' untranslated region	en
dc.subject.other	animal cell	en
dc.subject.other	animal tissue	en
dc.subject.other	article	en
dc.subject.other	computer interface	en
dc.subject.other	controlled study	en
dc.subject.other	gene expression profiling	en
dc.subject.other	gene expression regulation	en
dc.subject.other	gene mapping	en
dc.subject.other	gene targeting	en
dc.subject.other	genetic code	en
dc.subject.other	genetic database	en
dc.subject.other	human	en
dc.subject.other	human cell	en
dc.subject.other	human tissue	en
dc.subject.other	information processing	en
dc.subject.other	Internet	en
dc.subject.other	miRGen 2.0	en
dc.subject.other	molecular biology	en
dc.subject.other	mouse	en
dc.subject.other	nonhuman	en
dc.subject.other	priority journal	en
dc.subject.other	protein localization	en
dc.subject.other	protein RNA binding	en
dc.subject.other	RNA analysis	en
dc.subject.other	single nucleotide polymorphism	en
dc.subject.other	transcription regulation	en
dc.subject.other	algorithm	en
dc.subject.other	animal	en
dc.subject.other	biology	en
dc.subject.other	computer program	en
dc.subject.other	genetics	en
dc.subject.other	information retrieval	en
dc.subject.other	metabolism	en
dc.subject.other	methodology	en
dc.subject.other	nucleic acid database	en
dc.subject.other	tumor cell line	en
dc.subject.other	3' Untranslated Regions	en
dc.subject.other	Algorithms	en
dc.subject.other	Animals	en
dc.subject.other	Cell Line, Tumor	en
dc.subject.other	Computational Biology	en
dc.subject.other	Databases, Genetic	en
dc.subject.other	Databases, Nucleic Acid	en
dc.subject.other	Humans	en
dc.subject.other	Information Storage and Retrieval	en
dc.subject.other	Internet	en
dc.subject.other	Mice	en
dc.subject.other	MicroRNAs	en
dc.subject.other	Polymorphism, Single Nucleotide	en
dc.subject.other	Software	en
dc.subject.other	Transcription Factors	en
dc.title	miRGen 2.0: A database of microRNA genomic information and regulation	en
heal.type	journalArticle	en
heal.identifier.primary	10.1093/nar/gkp888	en
heal.identifier.secondary	http://dx.doi.org/10.1093/nar/gkp888	en
heal.identifier.secondary	gkp888	en
heal.language	English	en
heal.publicationDate	2010	en
heal.abstract	MicroRNAs are small, non-protein coding RNA molecules known to regulate the expression of genes by binding to the 3′UTR region of mRNAs. MicroRNAs are produced from longer transcripts which can code for more than one mature miRNAs. miRGen 2.0 is a database that aims to provide comprehensive information about the position of human and mouse microRNA coding transcripts and their regulation by transcription factors, including a unique compilation of both predicted and experimentally supported data. Expression profiles of microRNAs in several tissues and cell lines, single nucleotide polymorphism locations, microRNA target prediction on protein coding genes and mapping of miRNA targets of co-regulated miRNAs on biological pathways are also integrated into the database and user interface. The miRGen database will be continuously maintained and freely available at . http://www.microrna.gr/mirgen/. © The Author(s) 2009. Published by Oxford University Press.	en
heal.publisher	OXFORD UNIV PRESS	en
heal.journalName	Nucleic Acids Research	en
dc.identifier.doi	10.1093/nar/gkp888	en
dc.identifier.isi	ISI:000276399100022	en
dc.identifier.volume	38	en
dc.identifier.issue	SUPPL.1	en
dc.identifier.spage	D137	en
dc.identifier.epage	D141	en